STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0850Methyltranfer_dom domain-containing protein. (229 aa)    
Predicted Functional Partners:
DFW101_1245
Methyltransferase type 11.
 
 0.795
DFW101_0849
Uncharacterized protein.
       0.773
DFW101_1878
Uncharacterized protein.
 
     0.758
DFW101_1246
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
    
 
 0.747
DFW101_2845
Beta-ketoacyl synthase.
  
 0.746
DFW101_3427
Methyltransferase type 11.
 
 
 0.741
DFW101_0944
FAD dependent oxidoreductase.
   
 0.738
DFW101_1287
Adenylylsulfate kinase.
    
 0.731
DFW101_3173
Metallophosphoesterase.
  
    0.692
DFW101_0551
Methyltransferase type 11.
   
 0.685
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.