STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0859(S)-2-hydroxy-acid oxidase. (342 aa)    
Predicted Functional Partners:
DFW101_0459
D-lactate dehydrogenase (Cytochrome).
  
 0.961
DFW101_1141
FAD linked oxidase domain protein.
  
 0.961
DFW101_1142
CoB--CoM heterodisulfide reductase.
  
 0.961
DFW101_1514
FAD linked oxidase domain protein.
  
 0.961
DFW101_0689
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.925
DFW101_0694
Pyruvate:ferredoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.887
DFW101_0944
FAD dependent oxidoreductase.
  
 
 0.883
DFW101_0693
D-lactate dehydrogenase (Cytochrome).
  
 0.882
DFW101_1364
4-cresol dehydrogenase (Hydroxylating).
  
 0.882
DFW101_1740
D-lactate dehydrogenase (Cytochrome).
  
 0.882
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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