STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1171Adenylylsulfate kinase. (192 aa)    
Predicted Functional Partners:
DFW101_1287
Adenylylsulfate kinase.
 
 
 0.977
DFW101_1693
Sulfate adenylyltransferase.
 
 
 0.975
DFW101_3415
Molybdate-transporting ATPase.
  
 
 0.945
DFW101_1170
Aminoglycoside phosphotransferase.
 
     0.932
DFW101_2074
Uroporphyrin-III C-methyltransferase.
  
  
 0.889
cysQ
3'(2'),5'-bisphosphate nucleotidase CysQ; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
 
 
 0.776
DFW101_3641
Cysteine synthase.
  
  
 0.745
DFW101_2407
Glutamate synthase (NADPH).
     
 0.721
DFW101_1169
Peptidase M48 Ste24p.
       0.697
DFW101_1870
Adenylylsulfate reductase, alpha subunit.
    
 0.686
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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