STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1192Secretion protein HlyD family protein. (343 aa)    
Predicted Functional Partners:
DFW101_1191
Sulfate-transporting ATPase.
  
 0.965
DFW101_1190
ABC-2 type transporter.
 
  
 0.964
DFW101_2192
Outer membrane efflux protein.
 
 0.934
DFW101_2104
Outer membrane efflux protein.
  
 0.909
DFW101_3001
Outer membrane efflux protein.
  
 0.909
DFW101_1193
Regulatory protein TetR.
 
   
 0.847
DFW101_2106
Uncharacterized protein.
 
  
 0.674
DFW101_0070
Uncharacterized protein.
  
  
 0.621
DFW101_3457
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.610
DFW101_1194
Uncharacterized protein.
  
  
 0.566
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.