STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1257Pyruvate carboxylase. (1231 aa)    
Predicted Functional Partners:
DFW101_1258
Biotin/acetyl-CoA-carboxylase ligase.
 
 
 0.984
DFW101_3252
Pyruvate carboxylase.
 
 
0.947
DFW101_0694
Pyruvate:ferredoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
    
 0.894
DFW101_3253
Acetyl-CoA carboxylase.
 
 0.887
DFW101_1256
Pyruvate, water dikinase., Phosphoenolpyruvate--protein phosphotransferase.
  
 
 0.864
DFW101_0034
Succinate--CoA ligase (ADP-forming).
  
 
 0.852
DFW101_0878
Malonyl CoA-acyl carrier protein transacylase.
 
  
 0.823
DFW101_1231
2-oxoacid:acceptor oxidoreductase, alpha subunit.
     
 0.795
DFW101_2297
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.791
DFW101_1495
Citrate synthase; Belongs to the citrate synthase family.
  
 0.785
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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