STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1275Cytochrome c, class III, conserved region. (189 aa)    
Predicted Functional Partners:
DFW101_0944
FAD dependent oxidoreductase.
  
 0.999
DFW101_1274
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.998
DFW101_1272
Molybdopterin oxidoreductase membrane subunit.
 
 
 0.996
DFW101_1273
Molybdopterin oxidoreductase iron-sulfur cluster-binding subunit.
 
 
 0.996
DFW101_1567
Cytochrome o ubiquinol oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 0.996
DFW101_1568
Cytochrome o ubiquinol oxidase, subunit III.
  
 0.996
DFW101_1566
Ubiquinol oxidase subunit 2.
   
 0.994
DFW101_1791
Cytochrome c family protein.
   
 0.987
DFW101_0959
Processing peptidase; Belongs to the peptidase M16 family.
  
 0.985
DFW101_2984
Processing peptidase.
   
 0.983
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.