STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1533Uncharacterized protein. (134 aa)    
Predicted Functional Partners:
rsmH
Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.805
mraZ
Transcriptional regulator MraZ; Belongs to the MraZ family.
       0.805
DFW101_2933
Uncharacterized protein.
  
     0.774
DFW101_0771
Uncharacterized protein.
  
     0.773
DFW101_2478
DNA polymerase III delta.
  
     0.773
DFW101_1486
Uncharacterized protein.
  
     0.772
DFW101_1902
Uncharacterized protein.
  
     0.772
DFW101_2709
Uncharacterized protein.
  
     0.772
DFW101_0393
Uncharacterized protein.
  
     0.771
DFW101_1485
Uncharacterized protein.
  
     0.771
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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