STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1658Pyruvate, water dikinase. (876 aa)    
Predicted Functional Partners:
DFW101_0694
Pyruvate:ferredoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
    
 0.877
DFW101_1231
2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
 0.746
DFW101_2486
Ketose-bisphosphate aldolase class-II.
 
  
 0.704
DFW101_1256
Pyruvate, water dikinase., Phosphoenolpyruvate--protein phosphotransferase.
  
  
 
0.676
DFW101_0459
D-lactate dehydrogenase (Cytochrome).
    
 0.664
DFW101_1141
FAD linked oxidase domain protein.
    
 0.664
DFW101_1142
CoB--CoM heterodisulfide reductase.
    
 0.664
DFW101_1514
FAD linked oxidase domain protein.
    
 0.664
DFW101_2049
Pyruvate, water dikinase.
 
  
 
0.662
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
 0.644
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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