STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1686Nitroreductase. (171 aa)    
Predicted Functional Partners:
DFW101_1684
Flavin reductase domain protein FMN-binding.
 
 0.919
DFW101_1683
Flavin reductase domain protein FMN-binding.
 
 
 0.906
DFW101_1685
Flavin reductase domain protein FMN-binding.
 
 
 0.903
DFW101_1682
NADPH-dependent FMN reductase.
 
  
 0.854
DFW101_2845
Beta-ketoacyl synthase.
   
 
 0.769
DFW101_2074
Uroporphyrin-III C-methyltransferase.
  
 
 0.756
DFW101_0048
Long-chain-fatty-acid--CoA ligase.
   
 
 0.744
DFW101_2846
4-coumarate--CoA ligase.
   
 
 0.744
DFW101_3592
YcaO-domain protein.
  
  
 0.700
DFW101_1698
Cobalbumin biosynthesis protein.
 
 
 0.699
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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