STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1773Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
DFW101_1774
Diguanylate cyclase.
  
    0.757
DFW101_1858
TVP38/TMEM64 family membrane protein.
 
     0.747
DFW101_1733
Glycosyl transferase family 2.
 
     0.689
DFW101_1207
Glycosyl transferase family 2.
  
     0.686
DFW101_1734
Uncharacterized protein.
 
     0.660
DFW101_2048
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
     0.657
DFW101_1208
DUF547 domain-containing protein.
 
     0.624
aroE
Shikimate dehydrogenase (NADP(+)); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.536
DFW101_3318
Dihydrolipoyl dehydrogenase.
 
     0.523
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.