STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1929Glutamine synthetase type III domain-containing protein; Belongs to the glutamine synthetase family. (726 aa)    
Predicted Functional Partners:
DFW101_2407
Glutamate synthase (NADPH).
    
 0.894
DFW101_0008
Glutamate synthase (NADPH), homotetrameric.
    
 0.832
DFW101_2406
Glutamate synthase (NADPH); Belongs to the glutamate synthase family.
  
 
 0.762
DFW101_2405
Glutamine amidotransferase class-II.
  
 
 0.737
DFW101_2624
4Fe-4S ferredoxin-type domain-containing protein.
    
 0.728
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
 
 0.727
DFW101_2771
Glutamine synthetase, type I; Belongs to the glutamine synthetase family.
    
0.726
DFW101_1117
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 
 0.710
DFW101_3132
Ferredoxin-dependent glutamate synthase.
  
 
 0.691
DFW101_3450
Glutamate synthase (NADPH).
    
 0.678
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.