Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| DFW101_0252 | DFW101_1614 | NAD-dependent deacetylase. | L-threonine dehydratase catabolic TdcB; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.488 |
| DFW101_0252 | DFW101_2050 | NAD-dependent deacetylase. | Transcriptional regulator, PadR-like family. | 0.472 |
| DFW101_0252 | DFW101_2065 | NAD-dependent deacetylase. | Transcriptional regulator, PadR-like family. | 0.472 |
| DFW101_1191 | DFW101_2050 | Sulfate-transporting ATPase. | Transcriptional regulator, PadR-like family. | 0.491 |
| DFW101_1191 | DFW101_2065 | Sulfate-transporting ATPase. | Transcriptional regulator, PadR-like family. | 0.491 |
| DFW101_1614 | DFW101_0252 | L-threonine dehydratase catabolic TdcB; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | NAD-dependent deacetylase. | 0.488 |
| DFW101_1614 | DFW101_2050 | L-threonine dehydratase catabolic TdcB; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Transcriptional regulator, PadR-like family. | 0.580 |
| DFW101_1614 | DFW101_2065 | L-threonine dehydratase catabolic TdcB; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Transcriptional regulator, PadR-like family. | 0.580 |
| DFW101_2050 | DFW101_0252 | Transcriptional regulator, PadR-like family. | NAD-dependent deacetylase. | 0.472 |
| DFW101_2050 | DFW101_1191 | Transcriptional regulator, PadR-like family. | Sulfate-transporting ATPase. | 0.491 |
| DFW101_2050 | DFW101_1614 | Transcriptional regulator, PadR-like family. | L-threonine dehydratase catabolic TdcB; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.580 |
| DFW101_2050 | DFW101_2065 | Transcriptional regulator, PadR-like family. | Transcriptional regulator, PadR-like family. | 0.770 |
| DFW101_2050 | DFW101_2245 | Transcriptional regulator, PadR-like family. | Polyamine-transporting ATPase. | 0.491 |
| DFW101_2050 | DFW101_3236 | Transcriptional regulator, PadR-like family. | Fe(3+)-transporting ATPase. | 0.491 |
| DFW101_2065 | DFW101_0252 | Transcriptional regulator, PadR-like family. | NAD-dependent deacetylase. | 0.472 |
| DFW101_2065 | DFW101_1191 | Transcriptional regulator, PadR-like family. | Sulfate-transporting ATPase. | 0.491 |
| DFW101_2065 | DFW101_1614 | Transcriptional regulator, PadR-like family. | L-threonine dehydratase catabolic TdcB; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.580 |
| DFW101_2065 | DFW101_2050 | Transcriptional regulator, PadR-like family. | Transcriptional regulator, PadR-like family. | 0.770 |
| DFW101_2065 | DFW101_2066 | Transcriptional regulator, PadR-like family. | Uncharacterized protein. | 0.706 |
| DFW101_2065 | DFW101_2067 | Transcriptional regulator, PadR-like family. | Aspartate/glutamate/uridylate kinase. | 0.467 |
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