STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_2340Uncharacterized protein. (395 aa)    
Predicted Functional Partners:
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
     0.717
DFW101_0835
GTP-binding signal recognition particle SRP54 G-domain protein.
 
   
 0.709
DFW101_3467
Glycosyl transferase family 9.
 
    0.652
DFW101_0219
Glycosyl transferase family 9.
 
    0.651
DFW101_0492
Glycosyl transferase family 9.
 
    0.585
DFW101_2145
CheC domain protein.
  
     0.576
DFW101_0184
Flagellar hook-associated protein 3.
 
    0.556
DFW101_2565
Flagellar assembly protein FliH/Type III secretion system HrpE.
 
     0.547
DFW101_0505
Glycosyl transferase family 9.
  
    0.521
DFW101_2339
Acyl-CoA dehydrogenase domain-containing protein.
       0.510
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.