STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_2391Ion transport 2 domain protein. (401 aa)    
Predicted Functional Partners:
DFW101_2390
Putative transcriptional regulator, Crp/Fnr family.
 
  
  0.905
DFW101_0176
Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
    
   0.643
DFW101_0177
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.643
DFW101_0801
Glycerophosphoryl diester phosphodiesterase.
    
  0.594
DFW101_1617
SNARE associated golgi family protein.
     
 0.591
DFW101_2577
Phospholipase D/Transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
     
 0.591
psd
Phosphatidylserine decarboxylase alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
   
 
  0.575
DFW101_0906
Putative transcriptional regulator, Crp/Fnr family.
 
  
  0.556
DFW101_3179
Cyclic nucleotide-regulated small mechanosensitive ion channel.
 
  
 0.556
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
     
 0.547
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.