STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_2617Metal dependent phosphohydrolase. (401 aa)    
Predicted Functional Partners:
DFW101_2618
XshC-Cox1-family protein.
 
 
 0.993
DFW101_2620
Radical SAM domain protein.
     0.979
DFW101_2625
Aldehyde dehydrogenase (FAD-independent).
 
 
 0.977
DFW101_2621
C_GCAxxG_C_C family protein.
 
     0.958
DFW101_2623
Uncharacterized protein.
 
     0.956
DFW101_2622
Methyltransferase type 11.
 
     0.934
DFW101_0022
Carbon-monoxide dehydrogenase (Acceptor).
 
 
 0.926
DFW101_1557
Molybdopterin dehydrogenase FAD-binding.
 
 
 0.925
DFW101_2616
Phosphoglycerate mutase.
  
  0.923
DFW101_3385
Isoquinoline 1-oxidoreductase.
 
 
 0.899
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.