STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_2829FAD dependent oxidoreductase. (474 aa)    
Predicted Functional Partners:
DFW101_2832
Phospholipid/glycerol acyltransferase.
 
  
 0.967
DFW101_2827
Short-chain dehydrogenase/reductase SDR.
 
  
 0.963
DFW101_2841
Glycosyl transferase family 2.
 
  
 0.960
DFW101_2831
Phosphopantetheine-binding protein.
 
   
 0.954
DFW101_2835
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.938
DFW101_2836
MMPL domain protein.
 
     0.937
DFW101_2845
Beta-ketoacyl synthase.
 
   
 0.937
DFW101_2834
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ.
 
     0.936
DFW101_2842
Lipid A biosynthesis acyltransferase.
 
     0.936
DFW101_2838
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ.
 
   
 0.933
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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