STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_3169Phosphoribosyltransferase. (254 aa)    
Predicted Functional Partners:
DFW101_3583
ComEC/Rec2-related protein.
 
  
 0.941
DFW101_3285
DNA protecting protein DprA.
 
 
 0.940
DFW101_2561
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.920
DFW101_2479
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.907
DFW101_0792
Response regulator receiver protein.
  
  
 0.871
DFW101_2281
Prephenate dehydrogenase.
   
  
 0.849
DFW101_3186
Amine oxidase.
  
    0.840
DFW101_1887
Mg chelatase, subunit ChlI.
 
  
 0.836
DFW101_2920
Uncharacterized protein.
   
    0.832
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.831
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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