STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_3270Xenobiotic-transporting ATPase. (601 aa)    
Predicted Functional Partners:
DFW101_2876
AAA ATPase central domain protein; Belongs to the AAA ATPase family.
 
 
 0.949
DFW101_1487
Sel1 domain protein repeat-containing protein.
    
 0.912
DFW101_1301
Peptidoglycan-binding lysin domain protein.
   
 0.866
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.861
DFW101_3236
Fe(3+)-transporting ATPase.
 
 0.845
DFW101_2245
Polyamine-transporting ATPase.
0.792
DFW101_1191
Sulfate-transporting ATPase.
 
0.783
DFW101_3376
Uncharacterized protein.
 
 0.782
DFW101_1857
DNA photolyase FAD-binding.
    
 
 0.780
DFW101_2353
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 
 0.770
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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