STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_3274UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (337 aa)    
Predicted Functional Partners:
DFW101_3269
Glycosyl transferase family 2.
 
 
 0.864
DFW101_1100
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
0.853
DFW101_0483
UTP--glucose-1-phosphate uridylyltransferase.
 
  
 0.820
DFW101_1271
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.800
DFW101_3272
Uncharacterized protein.
    
 0.774
DFW101_0597
UDP-glucose 6-dehydrogenase.
  
 
 0.734
DFW101_2996
UDP-glucuronate decarboxylase.
 
0.733
DFW101_2436
UDP-glucuronate 5'-epimerase.
  
0.726
DFW101_3273
Uncharacterized protein.
     
 0.724
DFW101_1586
Uncharacterized protein.
    
 0.720
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.