STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ78231.1Glycoside hydrolase family 35; COGs: COG1874 Beta-galactosidase; InterPro IPR000421: IPR001944; KEGG: bth:BT_3654 beta-galactosidase precursor; PFAM: glycoside hydrolase family 35; coagulation factor 5/8 type domain protein; SPTR: Glycosyl hydrolase family 35; PFAM: F5/8 type C domain; Glycosyl hydrolases family 35. (786 aa)    
Predicted Functional Partners:
ADQ79767.1
InterPro IPR002241: IPR013222; KEGG: ote:Oter_1363 hypothetical protein; PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; SPTR: Putative uncharacterized protein; PFAM: NPCBM/NEW2 domain; Melibiase.
 
 
 0.967
ADQ79771.1
Alpha-galactosidase; InterPro IPR002241: IPR013222: IPR008009: IPR000111; KEGG: bth:BT_3592 alpha-galactosidase precursor; PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module; Ig family protein; glycoside hydrolase clan GH-D; PRIAM: Alpha-galactosidase; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; SPTR: Alpha-galactosidase; PFAM: NPCBM/NEW2 domain; Melibiase; Putative Ig domain.
 
 
 0.960
ADQ79954.1
COGs: COG3345 Alpha-galactosidase; InterPro IPR002241: IPR000111; KEGG: rmr:Rmar_2597 alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D; PRIAM: Alpha-galactosidase; SPTR: Alpha-galactosidase; PFAM: Melibiase.
 
  
 0.959
ADQ79956.1
COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR006104: IPR006102: IPR006103; KEGG: hau:Haur_2520 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-galactosidase; SPTR: Glycoside hydrolase family 2 sugar binding; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
 
 0.846
carA
COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR011761: IPR017926: IPR005483: IPR001317: IPR 011702: IPR002474: IPR000991: IPR005481: IPR005479: IPR005480:I PR011607: IPR006274: IPR006275; KEGG: aps:CFPG_497 carbamoyl-phosphate synthase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: Carbamoyl-phosphate synthase; TIGRFA [...]
 
      0.836
pyrB
COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR002082: IPR006130: IPR006132: IPR006131; KEGG: bfs:BF2262 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; PRIAM: Aspartate carbamoyltransferase; SPTR: Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: a [...]
 
      0.828
ADQ80273.1
COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR006102: IPR006103: IPR006101; KEGG: pdi:BDI_3103 beta-glycosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-galactosidase; SPTR: Putative uncharacterized protein; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
 
 0.824
ADQ78230.1
O-glycosyl hydrolase-like protein; COGs: COG5520 O-Glycosyl hydrolase; InterPro IPR000102; KEGG: cpi:Cpin_4557 O-glycosyl hydrolase-like protein; SPTR: Putative xylanase.
 
 
 0.811
ADQ79774.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterProIPR006101: IPR006104: IPR006102: IPR006103: IPR 004199; KEGG: cpi:Cpin_2720 glycoside hydrolase family 2 TIM barrel; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; SPTR: Glycoside hydrolase family 2 TIM barrel; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar [...]
 
 0.784
ADQ78735.1
Glycoside hydrolase family 42 domain 5 loop region; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterProIPR006558: IPR006101: IPR006104: IPR006102: IPR 006103: IPR004199; KEGG: sen:SACE_6726 beta-galactosidase; PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; SMART: LamG domain protein jellyroll fold domain protein; SPTR: Putative uncharacterized protein; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel do [...]
 
 0.762
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.