STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ78567.1KEGG: dba:Dbac_2549 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide pyruvyl transferase. (374 aa)    
Predicted Functional Partners:
ADQ78565.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pdi:BDI_2776 glycosyl transferase family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
  
  
 0.781
ADQ78569.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfs:BF1908 putative LPS biosynthesis related glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
  
 0.780
ADQ78566.1
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: bfs:BF3462 hypothetical protein; PFAM: nitroreductase; SPTR: Putative uncharacterized protein; PFAM: Nitroreductase family.
       0.779
ADQ78568.1
KEGG: sga:GALLO_0719 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADQ78561.1
COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451: IPR018357; KEGG: pru:PRU_0096 putative acetyl transferase; SPTR: Putative uncharacterized protein; PFAM: Bacterial transferase hexapeptide (three repeats).
  
  
 0.482
ADQ78562.1
Multi antimicrobial extrusion protein MatE; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: bfr:BF2776 putative flippase; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Putative uncharacterized protein; PFAM: MatE.
  
    0.460
ADQ78564.1
Hypothetical protein; COGs: COG3754 Lipopolysaccharide biosynthesis protein; KEGG: pru:PRU_0097 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.453
ADQ78563.1
KEGG: bvu:BVU_2394 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.449
ADQ80483.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362: IPR017475; KEGG: pdi:BDI_1744 putative glycosyltransferase; PFAM: sugar transferase; SPTR: Putative glycosyltransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.413
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.