STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ78756.1KEGG: pdi:BDI_1190 hypothetical protein; SPTR: Putative uncharacterized protein. (155 aa)    
Predicted Functional Partners:
ADQ78755.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: pdi:BDI_2789 putative dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
       0.773
ADQ78754.1
Hexapeptide transferase family protein, putative acetyltransferase; COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR001451; KEGG: pdi:BDI_2184 hexapeptide transferase family protein, putative acetyltransferase; SPTR: Hexapeptide transferase family protein.
       0.689
ADQ78994.1
COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: pdi:BDI_2504 exonuclease V subunit alpha; SPTR: Putative uncharacterized protein; PFAM: PIF1 helicase.
  
     0.615
ADQ80935.1
Hypothetical protein; KEGG: bth:BT_2817 putative TonB-dependent receptor; SPTR: Putative uncharacterized protein.
  
     0.556
ADQ78752.1
KEGG: bfs:BF1168 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: YbbR-like protein.
 
    0.522
ADQ78894.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: pdi:BDI_1114 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
  
     0.514
ADQ78753.1
DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fps:FP0405 cell surface polysaccharide biosynthesis protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Pleiotropic regulatory protein DegT; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family.
       0.474
ADQ78353.1
KEGG: bfs:BF1652 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.461
ADQ79226.1
GCN5-related N-acetyltransferase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: pdi:BDI_1432 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
  
     0.454
ADQ80008.1
Trigger factor; COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR008881: IPR005215; KEGG: pdi:BDI_2397 FKBP-type peptidyl-prolyl cis-transisomerase; PFAM: trigger factor domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: trigger factor; PFAM: Bacterial trigger factor protein (TF); TIGRFAM: trigger factor.
  
     0.446
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.