STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ78869.1KEGG: srm:SRM_01286 hypothetical protein; SPTR: Putative uncharacterized protein. (387 aa)    
Predicted Functional Partners:
ADQ79539.1
Ferredoxin-type protein; COGs: COG0348 Polyferredoxin; InterPro IPR017896: IPR017900; KEGG: bth:BT_0775 ferredoxin-type protein; SPTR: Putative uncharacterized protein.
   
    0.559
ADQ81056.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311: IPR017900: IPR017909: IPR017896; KEGG: caa:Caka_0067 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
   
    0.559
ADQ78887.1
Protein of unknown function DUF450; InterPro IPR007409; KEGG: pru:PRU_0539 hypothetical protein; PFAM: protein of unknown function DUF450; SPTR: Putative uncharacterized protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N).
  
  
 0.462
ADQ81084.1
COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterProIPR014001: IPR007409: IPR006935: IPR014021: IPR 001650; KEGG: mbu:Mbur_0509 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase; SPTR: Restriction endonuclease; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Domain of unknown function (DUF3559); Type III restriction enzyme, res subunit.
  
  
 0.462
ADQ80095.1
COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356: IPR004546: IPR002296: IPR002052; KEGG: ttu:TERTU_2390 type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; SPTR: Type I restriction-modification system, M subunit; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).
  
  
 0.457
ADQ81088.1
Site-specific DNA-methyltransferase (adenine-specific); COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356: IPR002052: IPR002296; KEGG: mma:MM_1669 type I restriction-modification system specificity subunit; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: N-6 DNA methylase; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
  
  
 0.457
ADQ78870.1
KEGG: tva:TVAG_059710 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.451
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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