STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ78896.1Protein of unknown function DUF164; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: bvu:BVU_3315 hypothetical protein; PFAM: protein of unknown function DUF164; SPTR: Putative uncharacterized protein; PFAM: Putative zinc ribbon domain. (258 aa)    
Predicted Functional Partners:
ADQ78897.1
Protein of unknown function DUF34; COGs: COG0327 conserved hypothetical protein; InterPro IPR017221: IPR002678; KEGG: bfs:BF2473 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
 
  
 0.925
ADQ78898.1
KEGG: pdi:BDI_1862 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.759
ADQ79590.1
COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474: IPR010827: IPR000184; KEGG: pdi:BDI_3699 putative outer membrane protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: Surface antigen variable number repeat; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
     0.743
ADQ81180.1
Hypothetical protein; COGs: COG1452 Organic solvent tolerance protein OstA; KEGG: pdi:BDI_3715 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.732
ADQ79080.1
KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.720
ADQ79138.1
Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: pdi:BDI_3493 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease; PFAM: Predicted permease YjgP/YjgQ family.
  
     0.692
ADQ79659.1
COGs: COG0681 Signal peptidase I; InterPro IPR000223: IPR019758: IPR019759; KEGG: pdi:BDI_2848 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
  
     0.680
ADQ81160.1
Hypothetical protein; InterPro IPR018195; KEGG: pdi:BDI_3077 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723).
  
     0.677
ADQ81159.1
KEGG: pdi:BDI_3077 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723).
  
     0.675
ADQ80633.1
KEGG: pdi:BDI_3326 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2795).
  
     0.666
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.