STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ78907.1COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: bvu:BVU_0145 glycoside hydrolase family beta-glycosidase; PFAM: beta-lactamase; SPTR: Glycoside hydrolase family beta-glycosidase; PFAM: Beta-lactamase. (451 aa)    
Predicted Functional Partners:
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.800
ADQ79222.1
COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: bvu:BVU_2969 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Na+/solute symporter; PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     0.726
ADQ80339.1
Peptidase U61 LD-carboxypeptidase A; COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: bth:BT_2549 putative carboxypeptidase; PFAM: peptidase U61 LD-carboxypeptidase A; SPTR: Putative uncharacterized protein; PFAM: LD-carboxypeptidase.
 
     0.562
ADQ78609.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: cpi:Cpin_2617 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase.
  
     0.531
ADQ80626.1
Lytic transglycosylase catalytic; InterPro IPR008258: IPR000189; KEGG: bfr:BF3565 putative membrane-bound lytic murein transglycosylase; PFAM: Lytic transglycosylase catalytic; SPTR: Putative uncharacterized protein; PFAM: Transglycosylase SLT domain.
  
   
 0.456
ADQ80141.1
Glycoside hydrolase family 3 domain protein; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764: IPR002772: IPR019800; KEGG: fba:FIC_01521 periplasmic beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; SPTR: Beta-glucosidase; PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.401
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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