STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79017.1COGs: COG3867 Arabinogalactan endo-1 4-beta-galactosidase; InterPro IPR011683; KEGG: sli:Slin_6460 arabinogalactan endo-1,4-beta-galactosidase; PFAM: glycosyl hydrolase 53 domain protein; PRIAM: Arabinogalactan endo-1,4-beta-galactosidase; SPTR: Arabinogalactan endo-1,4-beta-galactosidase; PFAM: Glycosyl hydrolase family 53. (348 aa)    
Predicted Functional Partners:
ADQ79956.1
COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR006104: IPR006102: IPR006103; KEGG: hau:Haur_2520 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-galactosidase; SPTR: Glycoside hydrolase family 2 sugar binding; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
 0.775
ADQ80499.1
Glucuronoarabinoxylan endo-1,4-beta-xylanase; COGs: COG5520 O-Glycosyl hydrolase; InterPro IPR001139; KEGG: cac:CA_P0119 xylan degradation protein; PFAM: glycoside hydrolase family 30; PRIAM: Glucuronoarabinoxylan endo-1,4-beta-xylanase; SPTR: Xylanase; PFAM: O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
  
   
 0.595
ADQ79957.1
COGs: COG3934 Endo-beta-mannanase; InterPro IPR000805; KEGG: bfr:BF0840 endo-1,4-beta-mannosidase; PRIAM: Mannan endo-1,4-beta-mannosidase; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
 
   
 0.571
ADQ80273.1
COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR006102: IPR006103: IPR006101; KEGG: pdi:BDI_3103 beta-glycosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-galactosidase; SPTR: Putative uncharacterized protein; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
 0.522
ADQ78827.1
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; InterPro IPR001547; KEGG: tbi:Tbis_2319 family 5 glycoside hydrolase; PFAM: glycoside hydrolase family 5; SPTR: Glycoside hydrolase family 5; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.515
ADQ78406.1
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; InterPro IPR001547: IPR018087; KEGG: aca:ACP_0988 glycosyl hydrolase, family 5; PFAM: glycoside hydrolase family 5; SPTR: Putative uncharacterized protein; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.482
ADQ79015.1
WD40-like beta Propeller containing protein; InterPro IPR011659; KEGG: pdi:BDI_0064 putative cytochrome c binding protein; PFAM: WD40-like beta Propeller containing protein; SPTR: Putative cytochrome c binding protein; PFAM: WD40-like Beta Propeller Repeat.
       0.449
ADQ79016.1
KEGG: pdi:BDI_0065 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.449
ADQ81141.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pdi:BDI_1559 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: SusD family; PFAM: SusD family.
 
    0.439
ADQ80685.1
Glycoside hydrolase family 16; COGs: COG2273 Beta-glucanase/Beta-glucan synthetase; InterPro IPR000757; KEGG: cpi:Cpin_5116 licheninase; PFAM: glycoside hydrolase family 16; SPTR: Beta-glucanase/Beta-glucan synthetase; PFAM: Glycosyl hydrolases family 16.
  
     0.433
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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