STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79050.1COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR008266: IPR017442: IPR000719: IPR 020635: IPR002290; KEGG: ptm:GSPATT00030230001 hypothetical protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain. (373 aa)    
Predicted Functional Partners:
ADQ80169.1
KEGG: bha:BH0735 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.563
ADQ80307.1
COGs: COG4585 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 013767: IPR003018: IPR011712: IPR003594: IPR001610; KEGG: nde:NIDE1491 putative hybrid sensor histidine kinase; PFAM: response regulator receiver; PAS fold domain protein; GAF domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein; ATP-binding region ATPase domain protein; SPTR: Multi-sensor signal transd [...]
 
  
 0.529
ADQ79187.1
COGs: COG4585 Signal transduction histidine kinase; InterProIPR005467: IPR000014: IPR000700: IPR013767: IPR 013655: IPR011712: IPR003594: IPR001610; KEGG: cyn:Cyan7425_4301 signal transduction histidine kinase; PFAM: PAS fold-3 domain protein; PAS fold domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; [...]
 
  
 0.419
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.