STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79344.1Beta-N-acetylhexosaminidase; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015883: IPR017871: IPR001540; KEGG: bth:BT_4337 beta-hexosaminidase precursor; PFAM: Glycoside hydrolase, family 20, catalytic core; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Beta-hexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2. (778 aa)    
Predicted Functional Partners:
ADQ78295.1
Chitinase; InterPro IPR000726; KEGG: pop:POPTR_831333 hypothetical protein; PFAM: glycoside hydrolase family 19; PRIAM: Chitinase; SPTR: Chitinase 1; PFAM: Chitinase class I.
  
  
 0.926
ADQ80419.1
COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933: IPR016286; KEGG: cak:Caul_1541 alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); PRIAM: Alpha-L-fucosidase; SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase.
 
  
 0.551
ADQ81053.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR011583: IPR001223: IPR002509: IPR001173; KEGG: bcg:BCG9842_B1815 polysaccharide deacetylase/glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; polysaccharide deacetylase; glycoside hydrolase family 18; SMART: chitinase II; SPTR: Polysaccharide deacetylase/glycosyl transferase, group 2 family protein; PFAM: Glycosyl hydrolases family 18; Polysaccharide deacetylase; Glycosyl transferase family 2.
 
   
 0.533
ADQ81181.1
COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: bfs:BF3615 putative exported N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; PRIAM: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SPTR: Putative uncharacterized protein; PFAM: N-acetylmuramoyl-L-alanine amidase.
     
  0.499
ADQ78231.1
Glycoside hydrolase family 35; COGs: COG1874 Beta-galactosidase; InterPro IPR000421: IPR001944; KEGG: bth:BT_3654 beta-galactosidase precursor; PFAM: glycoside hydrolase family 35; coagulation factor 5/8 type domain protein; SPTR: Glycosyl hydrolase family 35; PFAM: F5/8 type C domain; Glycosyl hydrolases family 35.
  
 0.492
ADQ79633.1
COGs: COG4299 conserved hypothetical protein; KEGG: cpi:Cpin_1463 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.468
udk
COGs: COG0572 Uridine kinase; InterPro IPR017975: IPR000764; KEGG: bfs:BF3035 uridine kinase; SPTR: Uridine kinase; TIGRFAM: uridine kinase; PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase.
   
   0.448
ADQ79634.1
Alpha-N-acetylglucosaminidase; InterPro IPR007781; KEGG: bth:BT_0438 alpha-N-acetylglucosaminidase precursor; PFAM: alpha-N-acetylglucosaminidase; PRIAM: Alpha-N-acetylglucosaminidase; SPTR: Putative uncharacterized protein; PFAM: Alpha-N-acetylglucosaminidase (NAGLU).
 
 
 
 0.433
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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