STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79547.1Hypothetical protein; KEGG: ecb:100050724 lysosomal trafficking regulator; SPTR: Glycerophosphoryl diester phosphodiesterase. (179 aa)    
Predicted Functional Partners:
ADQ79548.1
KEGG: rfr:Rfer_2538 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.634
ADQ79549.1
Hypothetical protein; KEGG: nda:Ndas_3707 glycosyl transferase group 1; SPTR: DNA topoisomerase.
       0.634
ADQ79550.1
Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: bfs:BF2110 putative amino acid transferase; PFAM: aminotransferase class I and II; SPTR: Putative amino acid transferase; PFAM: Aminotransferase class I and II.
       0.625
ADQ79546.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: pdi:BDI_3481 putative TonB dependent outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative TonB dependent outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain.
       0.459
ADQ79551.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
       0.414
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.