STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79710.1Protein of unknown function DUF1573; InterPro IPR011467; KEGG: bfs:BF0403 hypothetical protein; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573). (302 aa)    
Predicted Functional Partners:
ADQ79708.1
Hypothetical protein; InterPro IPR013026: IPR019734; KEGG: pdi:BDI_3437 hypothetical protein; SPTR: Putative membrane protein; PFAM: O-Antigen ligase.
 
     0.832
ADQ78898.1
KEGG: pdi:BDI_1862 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.669
ADQ80539.1
InterPro IPR020018; KEGG: zpr:ZPR_0091 gliding motility lipoprotein GldH-like protein; SPTR: Gliding motility lipoprotein gldH-like protein; TIGRFAM: gliding motility-associated lipoprotein GldH; TIGRFAM: gliding motility-associated lipoprotein GldH.
  
     0.649
ADQ79711.1
KEGG: bfs:BF0058 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.631
ADQ79701.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bth:BT_0671 outer membrane protein TolC, putative; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
  
     0.562
ADQ79709.1
Signal peptidase I; InterPro IPR000223: IPR019756: IPR019759; KEGG: pdi:BDI_3439 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
       0.544
ADQ80320.1
COGs: COG1587 Uroporphyrinogen-III synthase; KEGG: bvu:BVU_1187 uroporphyrinogen-III synthase; SPTR: Uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen-III synthase HemD.
  
     0.532
ADQ79073.1
KEGG: pdi:BDI_0476 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.508
ADQ79715.1
Ricin B lectin; InterPro IPR000772; KEGG: cpi:Cpin_2462 hypothetical protein; PFAM: Ricin B lectin; SPTR: Putative uncharacterized protein; PFAM: Ricin-type beta-trefoil lectin domain.
 
     0.505
ADQ79024.1
Hypothetical protein; InterPro IPR013026: IPR019734; KEGG: bth:BT_3220 TPR repeat-containing protein; SPTR: Putative TPR-repeat-containing protein.
  
     0.500
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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