STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79922.1KEGG: phe:Phep_3353 hypothetical protein; SPTR: Putative uncharacterized protein. (282 aa)    
Predicted Functional Partners:
ADQ79921.1
Transcriptional regulator, GntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: dfe:Dfer_5187 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family.
       0.788
ADQ79920.1
Hypothetical protein; KEGG: pfh:PFHG_03136 conserved hypothetical protein; SPTR: Putative uncharacterized protein.
       0.774
ADQ79923.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: cpi:Cpin_7291 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
       0.767
ADQ79924.1
KEGG: cts:Ctha_0996 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Nitrogen fixation protein of unknown function.
       0.414
ADQ79919.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR008454: IPR012910: IPR000531; KEGG: pdi:BDI_3668 putative TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Cna B domain protein; SPTR: Putative TonB-dependent receptor; PFAM: TonB dependent receptor.
       0.402
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.