Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ80138.1TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: sli:Slin_6053 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (988 aa)    
Predicted Functional Partners:
ADQ80139.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: sli:Slin_6054 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
     0.932
ADQ80137.1
COGs: COG5368 conserved hypothetical protein; InterPro IPR016883; KEGG: bfs:BF4167 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Protein of unknown function (DUF3131).
 
     0.837
ADQ78631.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: dfe:Dfer_1619 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
 
     0.768
ADQ79746.1
RagB/SusD domain protein; InterPro IPR020557: IPR012944; KEGG: cpi:Cpin_5314 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
 
     0.767
ADQ78234.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pdi:BDI_1676 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
     0.762
ADQ81141.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pdi:BDI_1559 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: SusD family; PFAM: SusD family.
 
   
 0.761
ADQ80147.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pru:PRU_2703 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.754
ADQ80645.1
RagB/SusD domain protein; InterPro IPR012944: IPR019734; KEGG: zpr:ZPR_0383 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.730
ADQ80002.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bth:BT_3045 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
     0.706
ADQ80652.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: cpi:Cpin_6147 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.699
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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