STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80139.1RagB/SusD domain protein; InterPro IPR012944; KEGG: sli:Slin_6054 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family. (503 aa)    
Predicted Functional Partners:
ADQ80138.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: sli:Slin_6053 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
     0.932
ADQ80137.1
COGs: COG5368 conserved hypothetical protein; InterPro IPR016883; KEGG: bfs:BF4167 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Protein of unknown function (DUF3131).
 
    0.859
ADQ80143.1
COGs: COG5368 conserved hypothetical protein; InterPro IPR016883; KEGG: dfe:Dfer_4453 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2329).
 
    0.754
ADQ80472.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: sli:Slin_6451 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
 
 
 0.753
ADQ81142.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531: IPR018170; KEGG: pdi:BDI_1558 hypothetical protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
   
 0.732
ADQ80140.1
Coagulation factor 5/8 type domain protein; InterPro IPR003961: IPR000421: IPR006710; KEGG: pdi:BDI_3065 beta-glycosidase; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 43; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; SPTR: Glycoside hydrolase, family 43; PFAM: F5/8 type C domain; Fibronectin type III domain; Glycosyl hydrolases family 43.
 
     0.730
ADQ78233.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: bvu:BVU_0505 hypothetical protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-linked outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
   
 0.727
ADQ80473.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: cpi:Cpin_6565 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
  
 
   0.718
ADQ79745.1
TonB-dependent receptor; InterPro IPR012910: IPR000531; KEGG: cpi:Cpin_5315 TonB-dependent receptor plug; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
   
 0.713
ADQ80651.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: cpi:Cpin_6148 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
   
 0.702
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.