STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80168.1COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: chu:CHU_1240 bifunctional xylanase/esterase; CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein; PFAM: polysaccharide deacetylase; SPTR: CHU large protein; candidate bifunctional xylanase/esterase; CBM9 module, Glycoside Hydrolase Family 8 protein and Carbohydrate Esterase Family 4 protein; PFAM: Polysaccharide deacetylase. (338 aa)    
Predicted Functional Partners:
ADQ79801.1
Glycoside hydrolase family 8; COGs: COG3405 Endoglucanase Y; InterPro IPR002037; KEGG: sli:Slin_1409 glycoside hydrolase family 8; PFAM: glycoside hydrolase family 8; SPTR: Glycoside hydrolase family 8; PFAM: Glycosyl hydrolases family 8.
   
 0.724
ADQ80169.1
KEGG: bha:BH0735 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.460
ADQ81053.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR011583: IPR001223: IPR002509: IPR001173; KEGG: bcg:BCG9842_B1815 polysaccharide deacetylase/glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; polysaccharide deacetylase; glycoside hydrolase family 18; SMART: chitinase II; SPTR: Polysaccharide deacetylase/glycosyl transferase, group 2 family protein; PFAM: Glycosyl hydrolases family 18; Polysaccharide deacetylase; Glycosyl transferase family 2.
  
  
 0.453
ADQ80089.1
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: fjo:Fjoh_2522 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Candidate esterase; Carbohydrate esterase family 4; PFAM: Polysaccharide deacetylase.
  
     0.432
ADQ78866.1
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: sli:Slin_4676 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide deacetylase.
  
     0.429
ADQ80853.1
COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR006148: IPR003737: IPR018321; KEGG: rmr:Rmar_2791 glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; LmbE family protein; SPTR: Glucosamine-6-phosphate deaminase; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; GlcNAc-PI de-N-acetylase.
  
   
 0.409
ADQ80747.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: zpr:ZPR_4299 transmembrane family-2 glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Group 2 family glycosyl transferase; PFAM: Glycosyl transferase family 2.
  
  
 0.406
ADQ81104.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: bfs:BF1603 putative transmembrane glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Transmembrane glycosyl transferase; PFAM: Glycosyl transferase family 2.
  
  
 0.406
ADQ79950.1
Cellulase; InterPro IPR018087: IPR001547; KEGG: fjo:Fjoh_4946 cellulase; PFAM: glycoside hydrolase family 5; PRIAM: Cellulase; SPTR: Cellulase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
   
 0.402
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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