STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80172.1Methyltransferase small; COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR007848; KEGG: ote:Oter_0665 methyltransferase small; PFAM: methyltransferase small; SPTR: Methyltransferase small; PFAM: Methyltransferase small domain. (254 aa)    
Predicted Functional Partners:
prfA
Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
 
 0.925
ADQ80173.1
KEGG: pkn:PKH_113880 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.520
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
   0.495
atpH
ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.
  
   0.484
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
  
   0.453
ADQ80171.1
KEGG: esi:Exig_2192 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.443
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
  
   0.440
ADQ80572.1
ATPase, F1 complex, delta/epsilon subunit; COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546; KEGG: pru:PRU_1198 ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; SPTR: ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain.
  
   0.440
ADQ80315.1
AAA ATPase; COGs: COG0572 Uridine kinase; InterPro IPR003593; KEGG: bth:BT_2527 uridine kinase (uridine monophosphokinase); SMART: AAA ATPase; SPTR: Uridine kinase (Uridine monophosphokinase); PFAM: Phosphoribulokinase / Uridine kinase family.
 
   0.421
ADQ80176.1
DnaJ central domain protein; InterPro IPR001305; KEGG: cco:CCC13826_0903 hypothetical protein; PFAM: DnaJ central domain protein; SPTR: Putative uncharacterized protein.
 
     0.411
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.