STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80378.1Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184; KEGG: bth:BT_0814 putative outer membrane protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Surface antigen. (753 aa)    
Predicted Functional Partners:
ADQ79081.1
Outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: pdi:BDI_1192 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO.
 
 
 0.825
ADQ81032.1
KEGG: bth:BT_0921 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.778
ADQ79080.1
KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   0.768
ADQ81163.1
KEGG: bth:BT_3341 hypothetical protein; SPTR: Lipoprotein.
  
     0.759
ADQ78353.1
KEGG: bfs:BF1652 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.752
ADQ80970.1
Peptidase M50; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478: IPR008915; KEGG: pdi:BDI_0481 membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SPTR: Membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP.
 
  
 0.747
ADQ78898.1
KEGG: pdi:BDI_1862 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.740
ADQ79916.1
KEGG: bth:BT_3849 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.739
ADQ79638.1
InterPro IPR000297; KEGG: pdi:BDI_0184 peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain.
 
 
 0.735
ADQ79643.1
KEGG: pdi:BDI_2485 cell division protein FtsQ; SPTR: Cell division protein FtsQ.
  
   
 0.731
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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