STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80388.1Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: fjo:Fjoh_2227 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative transmembrane protein; PFAM: Protein of unknown function DUF58. (443 aa)    
Predicted Functional Partners:
ADQ80393.1
Protein of unknown function DUF95 transmembrane; COGs: COG1300 membrane protein; InterPro IPR002798: IPR013838; KEGG: fjo:Fjoh_2232 hypothetical protein; PFAM: protein of unknown function DUF95 transmembrane; SPTR: Putative uncharacterized protein; PFAM: Integral membrane protein DUF95.
 
  
 0.956
ADQ80390.1
KEGG: fjo:Fjoh_2230 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.952
ADQ80391.1
KEGG: fjo:Fjoh_2231 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.950
ADQ80394.1
COGs: COG1714 membrane protein/domain; InterPro IPR010432; KEGG: fjo:Fjoh_2233 RDD domain-containing protein; PFAM: RDD domain containing protein; SPTR: RDD domain-containing protein; PFAM: RDD family.
 
    0.911
ADQ80389.1
ATPase associated with various cellular activities AAA_3; COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR016366; KEGG: fjo:Fjoh_2229 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase, AAA family; PFAM: ATPase family associated with various cellular activities (AAA).
  
 0.909
ADQ80392.1
KEGG: sli:Slin_4960 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.790
ADQ79024.1
Hypothetical protein; InterPro IPR013026: IPR019734; KEGG: bth:BT_3220 TPR repeat-containing protein; SPTR: Putative TPR-repeat-containing protein.
 
     0.464
ADQ79406.1
Transglutaminase domain-containing protein; InterPro IPR019734: IPR013026: IPR001440: IPR002931; KEGG: cpi:Cpin_1228 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Transglutaminase domain protein; PFAM: Transglutaminase-like superfamily.
 
  
 0.439
ADQ80387.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: cce:Ccel_1984 periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; PFAM: family.
       0.430
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.