STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80394.1COGs: COG1714 membrane protein/domain; InterPro IPR010432; KEGG: fjo:Fjoh_2233 RDD domain-containing protein; PFAM: RDD domain containing protein; SPTR: RDD domain-containing protein; PFAM: RDD family. (246 aa)    
Predicted Functional Partners:
ADQ80393.1
Protein of unknown function DUF95 transmembrane; COGs: COG1300 membrane protein; InterPro IPR002798: IPR013838; KEGG: fjo:Fjoh_2232 hypothetical protein; PFAM: protein of unknown function DUF95 transmembrane; SPTR: Putative uncharacterized protein; PFAM: Integral membrane protein DUF95.
 
    0.926
ADQ80388.1
Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: fjo:Fjoh_2227 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative transmembrane protein; PFAM: Protein of unknown function DUF58.
 
    0.911
ADQ80390.1
KEGG: fjo:Fjoh_2230 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.908
ADQ80391.1
KEGG: fjo:Fjoh_2231 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.908
ADQ80389.1
ATPase associated with various cellular activities AAA_3; COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR016366; KEGG: fjo:Fjoh_2229 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase, AAA family; PFAM: ATPase family associated with various cellular activities (AAA).
 
    0.705
ADQ80392.1
KEGG: sli:Slin_4960 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.611
ADQ79367.1
COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: pdi:BDI_0331 putative heat shock protein 15; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Putative heat shock protein 15; PFAM: S4 domain.
  
    0.499
ADQ79024.1
Hypothetical protein; InterPro IPR013026: IPR019734; KEGG: bth:BT_3220 TPR repeat-containing protein; SPTR: Putative TPR-repeat-containing protein.
 
     0.477
ADQ80565.1
Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cpi:Cpin_2178 putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SPTR: Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain.
  
    0.415
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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