STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80397.1KEGG: pti:PHATRDRAFT_38066 hypothetical protein; SPTR: Putative uncharacterized protein. (138 aa)    
Predicted Functional Partners:
ADQ80395.1
Hypothetical protein; KEGG: sep:SE1075 dihydrodipicolinate synthase; SPTR: Putative uncharacterized protein.
       0.570
ADQ80396.1
Hypothetical protein; KEGG: cat:CA2559_03565 thermolysin; SPTR: Putative uncharacterized protein.
       0.570
ADQ80398.1
COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: gdi:GDI_2747 catalytic tetrad; other site; PFAM: aldo/keto reductase; SPTR: Putative aldo/keto reductase; PFAM: Aldo/keto reductase family.
       0.432
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.