STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80499.1Glucuronoarabinoxylan endo-1,4-beta-xylanase; COGs: COG5520 O-Glycosyl hydrolase; InterPro IPR001139; KEGG: cac:CA_P0119 xylan degradation protein; PFAM: glycoside hydrolase family 30; PRIAM: Glucuronoarabinoxylan endo-1,4-beta-xylanase; SPTR: Xylanase; PFAM: O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family. (423 aa)    
Predicted Functional Partners:
ADQ79795.1
Glycoside hydrolase family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: sli:Slin_1420 glycoside hydrolase family 43; PFAM: glycoside hydrolase family 43; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
 0.794
ADQ79913.1
Non-processive endocellulase; InterPro IPR018221: IPR001701; KEGG: cce:Ccel_0755 glycoside hydrolase family 9; PFAM: glycoside hydrolase family 9; SPTR: Glycoside hydrolase family 9; PFAM: Glycosyl hydrolase family 9; N-terminal ig-like domain of cellulase.
  
     0.679
ADQ79769.1
Glycoside hydrolase family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR005084: IPR006584: IPR006710; KEGG: bvu:BVU_0032 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; SMART: cellulose binding type IV; SPTR: Possible endo-1,4-beta-xylanase; PFAM: Carbohydrate binding module (family 6); Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
 0.660
ADQ79770.1
Glycoside hydrolase family 43; InterPro IPR005084: IPR006584: IPR006710; KEGG: cth:Cthe_2196 carbohydrate-binding family 6 protein; PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; SMART: cellulose binding type IV; SPTR: Carbohydrate binding family 6; PFAM: Carbohydrate binding module (family 6); Glycosyl hydrolases family 43.
 
  
 0.656
ADQ79772.1
Glycoside hydrolase family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR005084: IPR006584: IPR006710; KEGG: zpr:ZPR_1028 glycosyl hydrolase; PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; SMART: cellulose binding type IV; SPTR: Putative uncharacterized protein; PFAM: Carbohydrate binding module (family 6); Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
 0.653
ADQ79950.1
Cellulase; InterPro IPR018087: IPR001547; KEGG: fjo:Fjoh_4946 cellulase; PFAM: glycoside hydrolase family 5; PRIAM: Cellulase; SPTR: Cellulase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.649
ADQ79017.1
COGs: COG3867 Arabinogalactan endo-1 4-beta-galactosidase; InterPro IPR011683; KEGG: sli:Slin_6460 arabinogalactan endo-1,4-beta-galactosidase; PFAM: glycosyl hydrolase 53 domain protein; PRIAM: Arabinogalactan endo-1,4-beta-galactosidase; SPTR: Arabinogalactan endo-1,4-beta-galactosidase; PFAM: Glycosyl hydrolase family 53.
  
   
 0.595
ADQ78879.1
KEGG: scl:sce7736 putative secreted protein; SPTR: Putative secreted protein.
  
     0.529
ADQ79765.1
Endo-1,4-beta-xylanase; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: sli:Slin_0351 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; PRIAM: Endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10; SPTR: Endo-1,4-beta-xylanase; PFAM: Glycosyl hydrolase family 10.
 
   
 0.521
ADQ78401.1
Glycoside hydrolase family 16; COGs: COG2273 Beta-glucanase/Beta-glucan synthetase; InterPro IPR003644: IPR000757: IPR000215; KEGG: cbe:Cbei_2828 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 16; Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Glycoside hydrolase, family 16; PFAM: Calx-beta domain; Glycosyl hydrolases family 16.
 
   
 0.500
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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