STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80536.1OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR006664; KEGG: coc:Coch_1558 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SPTR: OmpA family protein; PFAM: OmpA family. (439 aa)    
Predicted Functional Partners:
ADQ79559.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR006664: IPR003367; KEGG: fsu:Fisuc_1592 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; Thrombospondin type 3 repeat-containing protein; SPTR: OmpA domain protein; PFAM: OmpA family; Thrombospondin type 3 repeat.
  
  
 
0.622
ADQ79911.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664: IPR006665: IPR006690; KEGG: aav:Aave_4592 OmpA/MotB domain-containing protein; PFAM: OmpA/MotB domain protein; SPTR: OmpA/MotB; PFAM: OmpA family.
  
  
 
0.589
ADQ80768.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR006664; KEGG: cpi:Cpin_6431 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SPTR: OmpA/MotB domain protein; PFAM: OmpA family.
  
  
 
0.587
ADQ78267.1
Hypothetical protein; COGs: COG4580 Maltoporin (phage lambda and maltose receptor); InterPro IPR003192; KEGG: scl:sce7619 maltoporin precursor; SPTR: Maltoporin; PFAM: LamB porin.
     
 0.551
ADQ79197.1
KEGG: cpi:Cpin_2631 hypothetical protein; SPTR: Lipoprotein, putative.
  
    0.507
ADQ80535.1
AMP-dependent synthetase and ligase; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: pdi:BDI_0615 long-chain-fatty-acid-CoA ligase, putative; PFAM: AMP-dependent synthetase and ligase; SPTR: Putative uncharacterized protein; PFAM: AMP-binding enzyme.
       0.463
ADQ80338.1
NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064: IPR018392: IPR002482: IPR001809; KEGG: lsg:lse_2596 N-acetylmuramoyl-L-alanine amidase, family 4; PFAM: NLP/P60 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Endopeptidase LytF; PFAM: NlpC/P60 family; LysM domain.
 
 
 0.443
ADQ81153.1
InterPro IPR018550; KEGG: cat:CA2559_06020 hypothetical protein; PFAM: Lipid A 3-O-deacylase-related; SPTR: Putative uncharacterized protein; PFAM: Lipid A 3-O-deacylase (PagL).
  
    0.440
ADQ79594.1
Transcriptional regulator; InterPro IPR000551; KEGG: pdi:BDI_2545 transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator; PFAM: MerR family regulatory protein.
  
    0.425
ADQ79316.1
COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: bvu:BVU_3284 putative integration host factor IHF alpha subunit; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.
 
 
 0.414
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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