STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80824.1Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: bfs:BF1932 putative transmembrane protein; PFAM: histidine kinase internal region; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase. (355 aa)    
Predicted Functional Partners:
ADQ80823.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: bth:BT_1217 two-component system response regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
 
 0.962
ADQ78614.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492: IPR000215; KEGG: fjo:Fjoh_1679 LytTR family two component transcriptional regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Two-component response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
 
 0.839
ADQ80581.1
COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789; KEGG: bth:BT_3258 two-component system response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain.
 
 
 0.838
ADQ80864.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: sli:Slin_2868 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Two-component system response regulator, LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
 
 0.832
ADQ80865.1
Response regulator receiver and unknown domain protein; COGs: COG4565 Response regulator of citrate/malate metabolism; InterPro IPR001789; KEGG: zpr:ZPR_2432 two-component response transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain.
 
 
 0.831
ADQ80055.1
COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: bfr:BF0980 putative two-component system response regulator; PFAM: LytTr DNA-binding region; SPTR: Putative uncharacterized protein; PFAM: LytTr DNA-binding domain.
 
 
 0.814
ADQ80825.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: bfs:BF1933 putative permease component of ABC transporter; PFAM: protein of unknown function DUF214; SPTR: ABC transporter permease protein; PFAM: Predicted permease.
 
     0.628
ADQ80828.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: pdi:BDI_3352 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane efflux protein; PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family.
 
     0.621
ADQ80827.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: pdi:BDI_3353 periplasmic component of efflux system; PFAM: secretion protein HlyD family protein; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.534
ADQ80826.1
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: pdi:BDI_3354 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC transporter ATP-binding protein; PFAM: ABC transporter.
 
     0.478
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
Server load: low (30%) [HD]