STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80865.1Response regulator receiver and unknown domain protein; COGs: COG4565 Response regulator of citrate/malate metabolism; InterPro IPR001789; KEGG: zpr:ZPR_2432 two-component response transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain. (138 aa)    
Predicted Functional Partners:
ADQ80864.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: sli:Slin_2868 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Two-component system response regulator, LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
  
 
0.977
ADQ80866.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterProIPR001610: IPR000014: IPR013767: IPR010559: IPR 000700; KEGG: sli:Slin_2867 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; SPTR: Signal transduction histidine kinase, LytS; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.941
ADQ78614.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492: IPR000215; KEGG: fjo:Fjoh_1679 LytTR family two component transcriptional regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Two-component response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
  
  
 
0.926
ADQ78613.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: phe:Phep_0216 histidine kinase internal region; PFAM: histidine kinase internal region; SPTR: Histidine kinase internal region; PFAM: Histidine kinase.
 
 
 0.832
ADQ80824.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: bfs:BF1932 putative transmembrane protein; PFAM: histidine kinase internal region; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase.
 
 
 0.831
ADQ80580.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterProIPR001440: IPR011716: IPR010559: IPR003594: IPR 019734: IPR013026; KEGG: bfs:BF0100 putative two-component regulator sensor kinase; PFAM: histidine kinase internal region; Tetratricopeptide TPR_1 repeat-containing protein; Tetratricopeptide TPR_3 repeat-containing protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; Tetratricopeptide repeat; SPTR: Putative two-component regulator sensor kinase; PFAM: Histidine kinase; Histidine kinase-, [...]
 
 
 0.829
ADQ80823.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: bth:BT_1217 two-component system response regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
  
     0.774
ADQ80581.1
COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789; KEGG: bth:BT_3258 two-component system response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain.
  
     0.771
ADQ80055.1
COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: bfr:BF0980 putative two-component system response regulator; PFAM: LytTr DNA-binding region; SPTR: Putative uncharacterized protein; PFAM: LytTr DNA-binding domain.
  
     0.716
ADQ80867.1
Putative PAS/PAC sensor protein; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR000014: IPR001610: IPR013767: IPR000700; KEGG: dap:Dacet_1168 multi-sensor hybrid histidine kinase; PFAM: PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
       0.509
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.