Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ80958.1COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: bth:BT_3899 transcriptional regulator; PFAM: Penicillinase repressor; SPTR: Transcriptional regulator; PFAM: Penicillinase repressor. (118 aa)    
Predicted Functional Partners:
ADQ80957.1
COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR008756: IPR006260; KEGG: bfs:BF3767 hypothetical protein; PFAM: TonB domain; peptidase M56 BlaR1; SPTR: Putative uncharacterized protein; TIGRFAM: TonB family protein; PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
 
 0.996
ADQ80956.1
TonB family protein; InterPro IPR008756: IPR006260; KEGG: bfr:BF3992 TonB; PFAM: TonB domain; peptidase M56 BlaR1; SPTR: TonB; TIGRFAM: TonB family protein; PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
 
 0.991
ADQ80334.1
Peptidase M56 BlaR1; InterPro IPR008756; KEGG: bfs:BF3750 hypothetical protein; PFAM: peptidase M56 BlaR1; SPTR: Putative transcriptional regulator; PFAM: BlaR1 peptidase M56.
 
 
 0.984
ADQ78511.1
Peptidase M56 BlaR1; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756: IPR012910; KEGG: bfs:BF0821 hypothetical protein; PFAM: peptidase M56 BlaR1; TonB-dependent receptor plug; SPTR: Conserved hypothetical transmembrane protein; PFAM: BlaR1 peptidase M56; TonB-dependent Receptor Plug Domain.
 
 
 0.982
ADQ80335.1
Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: bfs:BF3751 putative antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: Putative transcriptional regulator; PFAM: Penicillinase repressor.
  
  
 
0.911
ADQ78512.1
Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: pdi:BDI_0832 hypothetical protein; PFAM: Penicillinase repressor; SPTR: Transcriptional regulator; PFAM: Penicillinase repressor.
  
  
 
0.910
ADQ80959.1
Redoxin domain protein; InterPro IPR013740: IPR017936; KEGG: cpi:Cpin_2205 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Redoxin domain protein; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family.
       0.727
ADQ80231.1
TonB family protein; InterPro IPR006260; KEGG: bvu:BVU_2976 outer membrane protein TonB; SPTR: Outer membrane protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
     0.534
ADQ80213.1
KEGG: dfe:Dfer_2695 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.519
ADQ80960.1
Peptidase S8 and S53 subtilisin kexin sedolisin; InterPro IPR017317: IPR000209; KEGG: bth:BT_3889 subtilisin-like serine protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Exported serine protease, subtilase family; PFAM: Subtilase family.
       0.477
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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