STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ81059.1DoxX family protein; InterPro IPR011637; KEGG: rmr:Rmar_2730 DoxX family protein; PFAM: DoxX family protein; SPTR: DoxX family protein; PFAM: DoxX. (128 aa)    
Predicted Functional Partners:
ADQ81058.1
Cytochrome c class I; InterPro IPR003088: IPR009056; KEGG: rbi:RB2501_04755 hypothetical protein; PFAM: cytochrome c class I; SPTR: Putative uncharacterized protein; PFAM: Cytochrome c.
       0.781
ADQ81060.1
COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; KEGG: dap:Dacet_1009 uncharacterized protein SCO1/SenC/PrrC; SPTR: Uncharacterized protein SCO1/SenC/PrrC; PFAM: SCO1/SenC.
       0.781
ADQ81061.1
COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: gme:Gmet_0249 cytochrome c oxidase subunit I; PFAM: cytochrome c oxidase subunit I; SPTR: Cytochrome c oxidase, subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
       0.781
ADQ81057.1
COGs: COG5557 Polysulphide reductase; InterPro IPR005614: IPR000215; KEGG: gur:Gura_2775 polysulphide reductase, NrfD; PFAM: Polysulphide reductase NrfD; SPTR: Polysulphide reductase NrfD; PFAM: Polysulphide reductase, NrfD.
       0.766
ADQ81056.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311: IPR017900: IPR017909: IPR017896; KEGG: caa:Caka_0067 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.598
ADQ81062.1
COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: dap:Dacet_1007 cytochrome c oxidase subunit III; PFAM: cytochrome c oxidase subunit III; SPTR: Cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase subunit III.
       0.467
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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