STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB35981.1Cysteine desulfurase-like protein, SufS subfamily; IMG reference gene:2506728816; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily. (414 aa)    
Predicted Functional Partners:
AGB35972.1
SUF system FeS assembly protein, NifU family; IMG reference gene:2506728807; PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family.
 
 
 0.934
AGB36686.1
ABC-type transport system involved in Fe-S cluster assembly, ATPase component; IMG reference gene:2506729547; TIGRFAM: FeS assembly ATPase SufC.
 
  
 0.933
AGB37167.1
Thioredoxin reductase; IMG reference gene:2506730069; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; TIGRFAM: thioredoxin-disulfide reductase; Glutaredoxin, GrxC family.
 
 
 0.928
AGB36413.1
Thioredoxin reductase; IMG reference gene:2506729267; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
 
  0.922
AGB39011.1
Thioredoxin reductase; IMG reference gene:2506731989; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.
 
 
  0.921
AGB39385.1
Selenocysteine lyase; IMG reference gene:2506732385; PFAM: Aminotransferase class-V.
  
  
 
0.919
AGB39428.1
Thioredoxin reductase; IMG reference gene:2506732429; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
 
  0.909
AGB36687.1
Iron-regulated ABC transporter membrane component SufB; IMG reference gene:2506729548; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 
 
 0.906
AGB36688.1
Iron-regulated ABC transporter permease protein SufD; IMG reference gene:2506729549; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD.
 
 
 0.905
AGB36956.1
Putative metal-sulfur cluster biosynthetic enzyme; IMG reference gene:2506729834; PFAM: Domain of unknown function DUF59; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit.
 
  
 0.527
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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