STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB36198.1Putative dithiol-disulfide isomerase involved in polyketide biosynthesis; IMG reference gene:2506729047; PFAM: DSBA-like thioredoxin domain. (210 aa)    
Predicted Functional Partners:
AGB39684.1
Truncated hemoglobin; IMG reference gene:2506732702; PFAM: Bacterial-like globin.
  
  
 0.609
AGB36199.1
Hypothetical protein; IMG reference gene:2506729048.
       0.604
AGB37943.1
Putative flavoprotein; IMG reference gene:2506730876; PFAM: NADPH-dependent FMN reductase.
  
    0.470
AGB39744.1
Putative flavoprotein; IMG reference gene:2506732763; PFAM: NADPH-dependent FMN reductase.
  
    0.470
AGB37167.1
Thioredoxin reductase; IMG reference gene:2506730069; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; TIGRFAM: thioredoxin-disulfide reductase; Glutaredoxin, GrxC family.
  
  
 0.441
AGB39013.1
NhaP-type Na+(K+)/H+ antiporter; IMG reference gene:2506731992; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain.
   
   0.430
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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