STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB36854.1IMG reference gene:2506729723; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone oxidoreductase chain 4, amino terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M. (509 aa)    
Predicted Functional Partners:
AGB36845.1
NADH:ubiquinone oxidoreductase subunit 3 (chain A); IMG reference gene:2506729714; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3.
 
 0.999
AGB36846.1
IMG reference gene:2506729715; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; Belongs to the complex I 20 kDa subunit family.
 
 0.999
AGB36847.1
IMG reference gene:2506729716; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit.
 
 0.999
AGB36848.1
NADH:ubiquinone oxidoreductase subunit 1 (chain H); IMG reference gene:2506729717; PFAM: NADH dehydrogenase.
 
 0.999
AGB36849.1
IMG reference gene:2506729718; TIGRFAM: NADH-quinone oxidoreductase, chain I.
 
 0.999
AGB36852.1
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); IMG reference gene:2506729721; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
 
 0.999
AGB36853.1
NADH dehydrogenase subunit L; IMG reference gene:2506729722; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L.
 
0.999
AGB36855.1
IMG reference gene:2506729724; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N.
 
0.999
AGB36608.1
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; IMG reference gene:2506729467; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit.
 
 0.998
AGB37796.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; IMG reference gene:2506730726; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
 0.998
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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