STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB37699.1Putative deacylase; IMG reference gene:2506730624; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family. (318 aa)    
Predicted Functional Partners:
AGB36065.1
Glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); IMG reference gene:2506728902; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family.
 
     0.622
AGB38720.1
Putative deacylase; IMG reference gene:2506731681; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
  
     0.616
AGB37698.1
Endoribonuclease L-PSP; IMG reference gene:2506730623; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative.
       0.550
AGB37000.1
alpha-L-glutamate ligase, RimK family; IMG reference gene:2506729879; PFAM: Protein of unknown function (DUF785); RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family.
 
     0.523
AGB38596.1
Putative deacylase; IMG reference gene:2506731553; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
  
     0.453
AGB37776.1
Putative deacylase; IMG reference gene:2506730702; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
  
     0.413
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.