STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB37754.1DMT(drug/metabolite transporter) superfamily permease; IMG reference gene:2506730680; PFAM: EamA-like transporter family. (329 aa)    
Predicted Functional Partners:
AGB37755.1
Transcriptional regulator, IclR family; IMG reference gene:2506730681.
       0.677
AGB37753.1
Peptide chain release factor 1 (eRF1); IMG reference gene:2506730679; PFAM: eRF1 domain 3; eRF1 domain 2; TIGRFAM: peptide chain release factor 1, archaeal and eukaryotic forms.
  
    0.525
AGB37752.1
Hypothetical protein; IMG reference gene:2506730678.
       0.406
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.